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Updated in November 2023
Daniel Ari Friedman
Works & Publications
Year = 20__
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Title
URL
Venue
Authors
PDF
DOI or ISBN
Keywords
Video
Perplexity Chat Link
23
Paper
15
A variational synthesis of evolutionary and developmental dynamics
Karl Friston
DAF
Axel Constant
Bleu Knight
Thomas Parr
John Campbell
10.3390/e25070964
Active InferenceComputationalBiologyBayesianGeneticsEcologyFree Energy Principle
The Active Inference Institute and Active Inference Ecosystem
DAF
Other authors
10.5281/zenodo.8266281
Active InferenceOnline TeamsCyberphysicalCognitive SecurityMapsNarrativeRhetoricEducationDeSciApplicationsDecentralized SystemsInformation EnvironmentComprehensivity
Distributed Science - The Scientific Process as Multi-Scale Active Inference
Francesco Balzan
John Campbell
Karl Friston
Maxwell Ramstead
DAF
Axel Constant
10.31219/osf.io/dnw5k
Active InferenceFree Energy PrincipleBiologyCognitive SecurityDeSciDecentralized Systems
Federated inference and belief sharing
Karl Friston
Thomas Parr
Conor Heins
Axel Constant
DAF
Takuya Isomura
Chris Fields
Tim Verbelen
Maxwell Ramstead
John Clippinger
Christopher Frith
10.1016/j.neubiorev.2023.105500
Active InferenceComputationalBiologyCognitive SecurityBayesianPhilosophyFree Energy Principle
A single-pheromone model accounts for empirical patterns of ant colony foraging previously modeled using two pheromones
Eric Saund
DAF
10.1016/j.cogsys.2023.02.005
AntsComputationalBiologyStigmergyDecentralized SystemsBehavior
Generalized Notation Notation for Active Inference Models
Jakub Smékal
DAF
10.5281/zenodo.7803328
Active InferenceComputationalFree Energy PrincipleApplications
An Account of Active Inference Modeling
DAF
10.5281/zenodo.8415313
Active InferenceFree Energy PrincipleBiologyCognitive SecurityDeSci
Open Access science needs Open Science Sensemaking (OSSm): open infrastructure for sharing scientific sensemaking data
Ronen Tamari
DAF
10.31222/osf.io/9nb3u
ComputationalCognitive SecurityOnline TeamsCyberphysicalDeSciInformation Environment
Generative Research Teams: Active Inference Compositions For Research and Meta-Science
Jakub Smékal
DAF
10.5281/zenodo.8164667
Active InferenceFree Energy PrincipleBiologyCognitive SecurityInnovationOnline TeamsDeSci
Experimental Entomology in the Age of Video
DAF
Judith Wexler
Sebastian Alvarado
e65002
AntsBiologyCyberphysicalBeesEcologyApplications
To comment or not to comment, that is the question!: Comment on “To copy or not to copy?...” by Héctor M. Manrique and Michael J. Walker
Dean Tickles
DAF
10.1016/j.plrev.2023.06.002
Active InferenceFree Energy PrincipleBiologyCognitive SecurityInnovationAttention
The Properties, Processes, and Perspectives Inter-Framework (P3IF): Multiplexing interdisciplinary requirements frameworks to manage information risk and foster cognitive security
Tom Wilkinson
Scott David
RJ Cordes
DAF
10.5281/zenodo.10034512
Cognitive SecurityHealth SecurityRequirements EngineeringInter-FrameworkP3IF
Cognitive Sovereignty & Active Inference in the State of Exception
DAF
10.5281/zenodo.10038232
Active InferenceCognitive SecurityCyberphysicalPhilosophyNarrativeConflictApplications
A guided tour through the spaces of particular “minds”: A Comment on “Path integrals, particular kinds, and strange things”
Ali Rahmjoo
DAF
10.1016/j.plrev.2023.11.001
Active InferenceFree Energy PrincipleBiologyDecentralized SystemsMapsNeuroscience
Enhanced NSF Postdoctoral Reporting via Synthetic Intelligence Language Processing
DAF
10.5281/zenodo.10160656
Cognitive SecurityCyberphysicalInnovationRhetoricEducationDecentralized SystemsStigmergyRequirements Engineering
RFI
1
Comments on AI Accountability Policy Submitted to NTIA Docket 2023-0005-0001 by IRSIRI, AII, PFH, and COGSEC
Scott David
Jumana Abu-Ghazaleh
DAF
RJ Cordes
10.5281/zenodo.8025957
Active InferenceComputationalCognitive SecurityCyberphysicalApplicationsInformation Environment
Presentation
6
William Blake & Buckminster Fuller: Lives in Juxtaposition (A study in Comprehensivity)
DAF
10.5281/zenodo.7514368
BlakeFullerSynergeticsComprehensivityHistoryArtPhilosophy
Monitoring memetic sense-making across digital publics: Combining rhetorical analysis and ecological frameworks for gathering and analyzing image-memes
Mridula Mascarenhas
DAF
RJ Cordes
None
RhetoricMemesDecentralized SystemsCognitive SecurityCyberphysical
Of Ants & Aging
DAF
10.5281/zenodo.7855582
AgingAntsComputationalBiologyMapsApplicationsHistory
Modern Nostr Index Card-based Knowledge Engineering
Andrew Claros
DAF
10.5281/zenodo.8118156
InnovationCyberphysicalComputationalApplicationsDecentralized SystemsInformation Environment
Slides for Iris
DAF
10.5281/zenodo.7838653
InnovationCyberphysicalCognitive SecurityComputationalActive InferenceApplicationsInformation Environment
Postdoc review (2020-2023) ~ September 25, 2023
DAF
10.5281/zenodo.8377988
Active InferenceAntsBiologyCognitive SecurityCyberphysicalGeneticsEducationSynergeticsComprehensivity
Livestream
2
DAF
Other authors
10.5281/zenodo.7964130
Active InferenceComputationalBiologyCognitive SecurityBayesianFree Energy Principle
DAF
Other authors
Active InferenceAntsBiologyCognitive SecurityInnovationPhilosophyArtSynergetics
22
Paper
9
From Users to (Sense)Makers: On the Pivotal Role of Stigmergic Social Annotation in the Quest for Collective Sensemaking
Ronen Tamari
DAF
William Fischer
Lauren Hebert
Dafna Shahaf
10.48550/arXiv.2205.06345
StigmergyAttentionAnnotationDecentralized Systems
Tracking Public Sensemaking through Rhetorical Annotation of Image Memes
Mridula Mascarenhas
RJ Cordes
Bleu Knight
Sarah Murphy
DAF
10.5281/zenodo.6904427
Online TeamsMemesInformation EnvironmentRhetoric
An Active Inference Ontology for Decentralized Science: from Situated Sensemaking to the Epistemic Commons
DAF
Shaun Applegate-Swanson
Arhan Choudhury
RJ Cordes
Bleu Knight
Ivan Metelkin
Alex Vyatkin
Shady El Damaty
Avel Guénin—Carlut
Siddhant Shrivastava
Amit Kumar Singh
Jakub Smékal
Caleb Tuttle
10.5281/zenodo.6320574
Active InferenceComputationalOnline TeamsCyberphysicalBayesianEcologyDeSciApplications
TrustFinder: Recommendations for a Community-Based System for Finding Trusted Sources and Evaluating Claims
RJ Cordes
Scott David
DAF
10.5281/zenodo.7093837
Online TeamsCyberphysicalActive InferenceDeSciApplicationsDecentralized Systems
Predictive Processing Interpretation of the Mirror Test and Implications of a Reflection Prediction for Human Cognition
Sean O'Connor
DAF
10.5281/zenodo.7377256
Active InferenceBiologyBayesianAttentionMirror Test
On free will or the lack thereof
Robert Sapolsky
Alexandra Mikhailova
DAF
10.5281/zenodo.7394901
Free WillNeuroscienceBehaviorPhilosophyBiology
Catechism for: "Towards Active Diffusion: A Tale of Multiple (den)Cities"
Jakub Smékal
DAF
10.5281/zenodo.7443848
Active InferenceDiffusion ModelsArtComputationalFree Energy PrincipleApplicationsInformation Environment
The Free Energy Principle & Active Inference: a Systematic Literature Analysis
Bleu Knight
RJ Cordes
DAF
10.5281/zenodo.7449368
Active InferenceBiologyNarrativePhilosophyFree Energy PrincipleDeSci
Systems Modeling and Cognitive Audits for Hypercert Ecosystems
Jakub Smékal
DAF
10.5281/zenodo.7626769
Active InferenceFree Energy PrincipleDeSciCognitive SecurityComputationalOnline TeamsCyberphysical
Book
2
Structuring the Information Commons: Open Standards and Cognitive Security
RJ Cordes
Scott David
DAF
Other authors
978-1-7364269-3-7
Active InferenceCognitive SecurityOnline TeamsCatechismCyberphysicalRhetoricEcologyConflictApplications
Poster
1
Active Blockference: cadCAD with Active Inference for cognitive systems modeling
Jakub Smékal
Arhan Choudhury
Amit Kumar Singh
Shady El Damaty
DAF
10.1007/978-3-031-28719-0_10
Active InferenceComputationalCognitive SecurityOnline TeamsCyberphysicalDecentralized Systems
21
Paper
6
Active Inferants: An Active Inference Framework for Ant Colony Behavior
DAF
Alex Tschantz
Maxwell Ramstead
Axel Constant
Karl Friston
10.3389/fnbeh.2021.647732
Active InferenceAntsComputationalBiologyStigmergy
Active Inference in Modeling Conflict
RJ Cordes
DAF
Scott David
10.5281/zenodo.5759807
Active InferenceCyberphysicalCognitive SecurityConflictMilitary
Digital Rhetorical Ecosystem Analysis: Sensemaking of Digital Memetic Discourse
DAF
RJ Cordes
Mridula Mascarenhas
10.5281/zenodo.5573947
RhetoricEcologyOnline Teams
Narrative Information Management
RJ Cordes
DAF
Alexandra Mikhailova
Shaun Applegate-Swanson
Bleu Knight
10.5281/zenodo.5573287
NarrativeCognitive Security
Collaborative Writing for Catechism-Based Teams
RJ Cordes
DAF
10.5281/zenodo.4633921
CatechismOnline Teams
Knowledge Management Archipelago
RJ Cordes
DAF
10.5281/zenodo.5034809
Online TeamsComputational
Book
1
Narrative Information Ecosystems: Conflict and Trust on the Endless Frontier
RJ Cordes
DAF
978-1-7364269-2-0
CatechismInnovationOnline TeamsActive InferenceCognitive SecurityNarrativeConflictMilitary
20
Paper
10
The Innovator’s Catechism
Steven Phelan
RJ Cordes
DAF
10.5281/zenodo.4383230
CatechismInnovation
The Facilitator's Catechism
RJ Cordes
DAF
10.5281/zenodo.4203765
CatechismOnline TeamsMilitaryCognitive Security
The neuroscience of decision making
Timothy Hanks
Alexandra Mikhailova
DAF
10.34700/8pg4-0h12
Bayesian
Active Inference & Behavior Engineering for Teams
Alex Vyatkin
Ivan Metelkin
Alexandra Mikhailova
RJ Cordes
DAF
10.5281/zenodo.4021163
Active InferenceOnline TeamsComputational
Infinite Games for Infinite Teams
RJ Cordes
DAF
None
ComputationalCognitive Security
Distributed physiology and the molecular basis of social life in eusocial insects
DAF
Tim Linksvayer
Brian Johnson
10.1016/j.yhbeh.2020.104757
AntsBiology
Emergent Teams for Complex Threats
RJ Cordes
DAF
10.5281/zenodo.3986085
Cognitive SecurityOnline TeamsMilitary
Gene expression variation in the brains of harvester ant foragers is associated with collective behavior
DAF
Ryan York
Austin Hilliard
Deborah Gordon
10.1038/s42003-020-0813-8
GeneticsAnts
Measurement of natural variation of neurotransmitter tissue content in red harvester ant brains among different colonies.
Mimi Shin
DAF
Deborah Gordon
BJ Venton
10.1007/s00216-019-02355-3
Ants
Book
1
The Great Preset: Remote Teams and Operational Art
RJ Cordes
DAF
978-1-7364269-0-6
Cognitive SecurityOnline TeamsCyberphysical
19
Paper
3
Dennett Explained
Daniel Dennett
Brendan Fleig-Goldstein
DAF
10.34700/7gkw-zh08
Philosophy
The ant colony as a test for scientific theories of consciousness
Eirik Søvik
DAF
10.1007/s11229-019-02130-y
AntsPhilosophy
The physiology of forager hydration and variation among harvester ant (Pogonomyrmex barbatus) colonies in collective foraging
DAF
Deborah Gordon
Mike Greene
10.1038/s41598-019-41586-3
AntsBiology
PhD Dissertation
1
Behavioral, Physiological, and Transcriptomic Variation Among Colonies of the Red Harvester Ant (Pogonomyrmex barbatus)
DAF
AntsBiologyEcology
18
Paper
4
“The Role of Dopamine in the Collective Regulation of Foraging in Harvester Ants”
DAF
Anna Pilko
Dorota Skowronska-Krawczy
Karolina M Krasinska
J Parker
J Hirsh
Deborah Gordon
10.1016/j.isci.2018.09.001
Ants
“Foraging behavior and locomotion of the invasive Argentine ant from winter aggregations”
Ben Burford
Ga-il Lee
DAF
E Brachmann
Rebia Khan
Dylan MacArthur-Waltz
Aiden McCarty
Deborah Gordon
10.1371/journal.pone.0202117
AntsBiology
"Partner Pen Play in Parallel (PPPiP): A New PPPiParadigm for Relationship Improvement"
Alexandra Mikhailova
DAF
10.3390/arts7030039
Art
“Of woodlice and men: A Bayesian account of cognition, life and consciousness”
Karl Friston
Martin Fortier
DAF
10.34700/h460-nz89
Active Inference
17
Paper
2
“Two lineages that need each other"
DAF
Deborah Gordon
10.1111/mec.13964
AntsGenetics
16
Paper
3
“Context-dependent expression of the foraging gene in field colonies of ants: the interacting roles of age, environment and task”
KK Ingram
Mike Greene
J Kahler
S Peteru
Deborah Gordon
DAF
10.1098/rspb.2016.0841
AntsGenetics
“Ant Genetics: Reproductive Physiology, Worker Morphology, and Behavior”
DAF
Deborah Gordon
10.1146/annurev-neuro-070815-013927
AntsGenetics
"Influence of Nuclear Structure on the formation of radiation-induced lethal lesions"
DAF
Lauren Tait
Andrew Vaughan
10.3109/09553002.2016.1144941
Genetics
15
Paper
3
“Could Ehrlichial Infection Cause Some of the Changes Associated with Leukemia, Myelodysplastic Diseases and Autoimmune Disorders, and Offer Antibiotic Treatment Options?”
CA Kallick
MBA Nyindo
DAF
10.1016/j.mehy.2015.09.015
Genetics
"Large Scale Coding Sequence Change Underlies the Evolution of Post-developmental Novelty in Honey Bees"
WC Jasper
Tim Linksvayer
Joel Atallah
DAF
JC Chiu
Brian Johnson
10.1093/molbev/msu292
BeesGenetics
“Commentary: Portuguese crypto-Jews: the genetic heritage of a complex history”
AW Marcus
Emily Ebel
10.3389/fgene.2015.00261
Genetics
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